Source code for SwarmFACE.j1sat

#!/usr/bin/env python3
# -*- coding: utf-8 -*-
import numpy as np
import pandas as pd
from viresclient import SwarmRequest
from .fac import *
from .utils import *
from SwarmFACE.plot_save.single_sat import *

[docs]def j1sat(dtime_beg, dtime_end, sat, res='LR', use_filter=True, \ alpha=None, N3d=None, N2d=None, tincl=None, er_db=0.5, \ angTHR = 30., savedata=True, saveplot=True): ''' High-level routine to estimate the FAC density with single-satellite method Parameters ---------- dtime_beg : str start time in ISO format 'YYYY-MM-DDThh:mm:ss' dtime_end : str end time in ISO format sat : [str] satellite, e.g. ['A'] res : str data resolution, 'LR' or 'HR' use_filter : boolean 'True' for data filtering alpha : float angle in the tangential plane between the (projection of) current sheet normal and the satellite velocity N3d : [float, float, float] current sheet normal vector in GEO frame N2d : [float, float, float] projection of the current sheet normal on the tangential plane tincl : [ISO time, ISO time] time interval when the information on current sheet inclination is valid er_db : float error in magnetic field measurements angTHR : float minimum accepted angle between the magnetic field vector and the tangential plane savedata : boolean 'True' for saving the results in an ASCII file saveplot : boolean 'True' for plotting the results Returns ------- j_df : DataFrame results input_df : DataFrame input data param : dict parameters used in the analysis ''' Bmodel="CHAOS-all='CHAOS-Core'+'CHAOS-Static'+'CHAOS-MMA-Primary'+'CHAOS-MMA-Secondary'" request = SwarmRequest() request.set_collection("SW_OPER_MAG"+sat[0]+"_"+res+"_1B") request.set_products(measurements=["B_NEC"], auxiliaries=['QDLat','QDLon','MLT'], models=[Bmodel], sampling_step=res_param(res)[0]) data = request.get_between(start_time = dtime_beg, end_time = dtime_end, asynchronous=True) print('Used MAG L1B file: ', data.sources[1]) dat_df = data.as_dataframe() # checks for missing and bad data points # sets bad B_NEC data (zero magnitude in L1b LR files) to NaN. # warns about the data filtering. timebads = None ndt = (pd.Timestamp(dtime_end) - pd.Timestamp(dtime_beg)).total_seconds()/res_param(res)[1] miss_data = 1 if len(dat_df) != ndt else 0 if miss_data: print('MISSING DATA FOR Sw'+sat[0]) ind_bads = np.where(\ np.linalg.norm(np.stack(dat_df['B_NEC'].values), axis = 1)==0)[0] if len(ind_bads): print('NR. OF BAD DATA POINTS: ', len(ind_bads)) timebads = dat_df.index[ind_bads] print(timebads.values) dat_df = dat_df.drop(dat_df.index[ind_bads]) if miss_data or len(ind_bads): print('DATA FILTERING MIGHT NOT WORK PROPERLY') ti = dat_df.index nti = len(ti) # stores position, magnetic field and magnetic model vectors in # corresponding data matrices Rsph = dat_df[['Latitude','Longitude','Radius']].values Bnec = np.stack(dat_df['B_NEC'].values, axis=0) Bmod = np.stack(dat_df['B_NEC_CHAOS-all'].values, axis=0) dBnec = Bnec - Bmod # magnetic field perturbation in NEC # transforms vectors in Gepgraphyc cartesian R, MATnec2geo = R_in_GEOC(Rsph) B = np.matmul(MATnec2geo,Bnec[...,None]).reshape(Bnec.shape) dB = np.matmul(MATnec2geo,dBnec[...,None]).reshape(dBnec.shape) if tincl is not None: if isinstance(tincl[0], str): tincl = pd.to_datetime(tincl) # compute the current and stores data in DataFrames j_df = singleJfac(ti, R, B, dB, alpha=alpha, N2d=N2d, N3d=N3d, tincl=tincl, \ res=res, er_db=er_db, angTHR = angTHR, use_filter = use_filter) dBgeo_df= pd.DataFrame(dB, columns=['dB_xgeo','dB_ygeo','dB_zgeo'],index=ti) input_df = dat_df.join(dBgeo_df) param = {'dtime_beg':dtime_beg,'dtime_end':dtime_end,'sat': sat, \ 'res': res, 'angTHR': angTHR, 'tincl': tincl, 'Bmodel':Bmodel, \ 'use_filter':use_filter, 'timebads':timebads} if savedata: save_single_sat(j_df, param) if saveplot: plot_single_sat(j_df, input_df, param) return j_df, input_df, param